{"id":207,"date":"2011-02-28T15:46:43","date_gmt":"2011-02-28T13:46:43","guid":{"rendered":"https:\/\/webs.uab.cat\/gbml\/viladevall-table-4\/"},"modified":"2011-02-28T15:46:43","modified_gmt":"2011-02-28T13:46:43","slug":"viladevall-table-4","status":"publish","type":"page","link":"https:\/\/webs.uab.cat\/gbml\/ca\/viladevall-table-4\/","title":{"rendered":"Viladevall Table 4"},"content":{"rendered":"

Table 4. Genes whose alkaline pH induction is reduced by calcineurin deficiency. Timing of the response is defined in the main text. Numbers indicate the induction level for each strain at the indicated timing(s). ND, not dependent, WD, weakly dependent, SD, strongly dependent, TD, totally dependent. See text for details.<\/p>\n

 <\/p>\n

 <\/p>\n

 <\/p>\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n
\n

ORF<\/em><\/strong><\/p>\n<\/td>\n

\n

Timing<\/em><\/strong><\/em><\/strong><\/p>\n<\/td>\n

\n

wt<\/strong><\/strong><\/p>\n<\/td>\n

\n

cnb1<\/em><\/strong><\/p>\n<\/td>\n

\n

calcineurin dependence<\/em><\/strong><\/p>\n<\/td>\n

\n

crz1<\/em><\/strong><\/p>\n<\/td>\n

\n

Crz1 dependence<\/em><\/strong><\/p>\n<\/td>\n

\n

CDRE motif<\/em><\/strong><\/p>\n<\/td>\n<\/tr>\n

\n

 <\/em><\/strong><\/p>\n<\/td>\n

\n

 <\/em><\/strong><\/p>\n<\/td>\n

\n

 <\/em><\/strong><\/p>\n<\/td>\n

\n

 <\/em><\/strong><\/p>\n<\/td>\n

\n

 <\/em><\/strong><\/p>\n<\/td>\n

\n

 <\/em><\/strong><\/p>\n<\/td>\n

\n

 <\/em><\/strong><\/p>\n<\/td>\n

\n

 <\/em><\/strong><\/p>\n<\/td>\n<\/tr>\n

\n

YAL005C (SSA1)<\/em><\/p>\n<\/td>\n

\n

E\/I<\/p>\n<\/td>\n

\n

2.2\/2.2<\/p>\n<\/td>\n

\n

1.1\/0.8<\/p>\n<\/td>\n

\n

SD\/SD<\/p>\n<\/td>\n

\n

1.6\/1.7<\/p>\n<\/td>\n

\n

SD\/SD<\/p>\n<\/td>\n

\n

0<\/p>\n<\/td>\n<\/tr>\n

\n

YBR016W<\/p>\n<\/td>\n

\n

E\/I<\/p>\n<\/td>\n

\n

2.7\/2.7<\/p>\n<\/td>\n

\n

1.5\/1.8<\/p>\n<\/td>\n

\n

WD\/WD<\/p>\n<\/td>\n

\n

1.0\/1.1<\/p>\n<\/td>\n

\n

WD\/WD<\/p>\n<\/td>\n

\n

0<\/p>\n<\/td>\n<\/tr>\n

\n

YBR287W<\/p>\n<\/td>\n

\n

E<\/p>\n<\/td>\n

\n

3.8<\/p>\n<\/td>\n

\n

1.9<\/p>\n<\/td>\n

\n

SD<\/p>\n<\/td>\n

\n

2.0<\/p>\n<\/td>\n

\n

SD<\/p>\n<\/td>\n

\n

1<\/p>\n<\/td>\n<\/tr>\n

\n

YBR296C (PHO89)<\/em><\/p>\n<\/td>\n

\n

E<\/p>\n<\/td>\n

\n

4.9<\/p>\n<\/td>\n

\n

0.7<\/p>\n<\/td>\n

\n

TD<\/p>\n<\/td>\n

\n

1.0<\/p>\n<\/td>\n

\n

TD<\/p>\n<\/td>\n

\n

2<\/p>\n<\/td>\n<\/tr>\n

\n

YCL020W<\/p>\n<\/td>\n

\n

E<\/p>\n<\/td>\n

\n

2.6<\/p>\n<\/td>\n

\n

1.1<\/p>\n<\/td>\n

\n

TD<\/p>\n<\/td>\n

\n

0.9<\/p>\n<\/td>\n

\n

TD<\/p>\n<\/td>\n

\n

0<\/p>\n<\/td>\n<\/tr>\n

\n

YDR077W (SED1)<\/em><\/p>\n<\/td>\n

\n

E<\/p>\n<\/td>\n

\n

2.7<\/p>\n<\/td>\n

\n

1.4<\/p>\n<\/td>\n

\n

WD<\/p>\n<\/td>\n

\n

1.7<\/p>\n<\/td>\n

\n

WD<\/p>\n<\/td>\n

\n

0<\/p>\n<\/td>\n<\/tr>\n

\n

YDR372C (VPS74)<\/em><\/p>\n<\/td>\n

\n

E<\/p>\n<\/td>\n

\n

2.9<\/p>\n<\/td>\n

\n

1.2<\/p>\n<\/td>\n

\n

SD<\/p>\n<\/td>\n

\n

1.3<\/p>\n<\/td>\n

\n

SD<\/p>\n<\/td>\n

\n

1<\/p>\n<\/td>\n<\/tr>\n

\n

YEL060C (PRB1)<\/em><\/p>\n<\/td>\n

\n

E<\/p>\n<\/td>\n

\n

9.1<\/p>\n<\/td>\n

\n

3.8<\/p>\n<\/td>\n

\n

SD<\/p>\n<\/td>\n

\n

4.1<\/p>\n<\/td>\n

\n

SD<\/p>\n<\/td>\n

\n

2<\/p>\n<\/td>\n<\/tr>\n

\n

YER062C (HOR2)<\/em><\/p>\n<\/td>\n

\n

E\/I<\/p>\n<\/td>\n

\n

2.8\/2.8<\/p>\n<\/td>\n

\n

1.0\/1.3<\/p>\n<\/td>\n

\n

TD\/TD<\/p>\n<\/td>\n

\n

2.5\/1.5<\/p>\n<\/td>\n

\n

ND\/WD<\/p>\n<\/td>\n

\n

0<\/p>\n<\/td>\n<\/tr>\n

\n

YGL253W (HXK2)<\/em><\/p>\n<\/td>\n

\n

E<\/p>\n<\/td>\n

\n

4.1<\/p>\n<\/td>\n

\n

1.3<\/p>\n<\/td>\n

\n

SD<\/p>\n<\/td>\n

\n

1.9<\/p>\n<\/td>\n

\n

SD<\/p>\n<\/td>\n

\n

0<\/p>\n<\/td>\n<\/tr>\n

\n

YGR032W (GSC2)<\/em><\/p>\n<\/td>\n

\n

I<\/p>\n<\/td>\n

\n

2.5<\/p>\n<\/td>\n

\n

0.8<\/p>\n<\/td>\n

\n

TD<\/p>\n<\/td>\n

\n

0.9<\/p>\n<\/td>\n

\n

TD<\/p>\n<\/td>\n

\n

2<\/p>\n<\/td>\n<\/tr>\n

\n

YGR157W (CHO2)<\/em><\/p>\n<\/td>\n

\n

E<\/p>\n<\/td>\n

\n

2.9<\/p>\n<\/td>\n

\n

1.3<\/p>\n<\/td>\n

\n

TD<\/p>\n<\/td>\n

\n

1.1<\/p>\n<\/td>\n

\n

TD<\/p>\n<\/td>\n

\n

0<\/p>\n<\/td>\n<\/tr>\n

\n

YGR211W (ZPR1)<\/em><\/p>\n<\/td>\n

\n

E<\/p>\n<\/td>\n

\n

2.8<\/p>\n<\/td>\n

\n

1.3<\/p>\n<\/td>\n

\n

TD<\/p>\n<\/td>\n

\n

2.0<\/p>\n<\/td>\n

\n

ND<\/p>\n<\/td>\n

\n

0<\/p>\n<\/td>\n<\/tr>\n

\n

YJR032W (CPR7)<\/em><\/p>\n<\/td>\n

\n

L<\/p>\n<\/td>\n

\n

3.2<\/p>\n<\/td>\n

\n

1.3<\/p>\n<\/td>\n

\n

SD<\/p>\n<\/td>\n

\n

1.2<\/p>\n<\/td>\n

\n

TD<\/p>\n<\/td>\n

\n

0<\/p>\n<\/td>\n<\/tr>\n

\n

YKL043W (PHD1)<\/em><\/p>\n<\/td>\n

\n

E<\/p>\n<\/td>\n

\n

4.1<\/p>\n<\/td>\n

\n

2.2<\/p>\n<\/td>\n

\n

WD<\/p>\n<\/td>\n

\n

2.4<\/p>\n<\/td>\n

\n

WD<\/p>\n<\/td>\n

\n

0<\/p>\n<\/td>\n<\/tr>\n

\n

YKL152C (GPM1)<\/em><\/p>\n<\/td>\n

\n

E<\/p>\n<\/td>\n

\n

2.2<\/p>\n<\/td>\n

\n

1.1<\/p>\n<\/td>\n

\n

SD<\/p>\n<\/td>\n

\n

1.0<\/p>\n<\/td>\n

\n

SD<\/p>\n<\/td>\n

\n

1<\/p>\n<\/td>\n<\/tr>\n

\n

YLR012C<\/p>\n<\/td>\n

\n

L<\/p>\n<\/td>\n

\n

2.1<\/p>\n<\/td>\n

\n

1.0<\/p>\n<\/td>\n

\n

SD<\/p>\n<\/td>\n

\n

1.0<\/p>\n<\/td>\n

\n

SD<\/p>\n<\/td>\n

\n

0<\/p>\n<\/td>\n<\/tr>\n

\n

YLR089C (ALT1)<\/em><\/p>\n<\/td>\n

\n

E<\/p>\n<\/td>\n

\n

3.7<\/p>\n<\/td>\n

\n

2.0<\/p>\n<\/td>\n

\n

WD<\/p>\n<\/td>\n

\n

2.5<\/p>\n<\/td>\n

\n

ND<\/p>\n<\/td>\n

\n

0<\/p>\n<\/td>\n<\/tr>\n

\n

YLR142W (PUT1)<\/em><\/p>\n<\/td>\n

\n

E<\/p>\n<\/td>\n

\n

2.6<\/p>\n<\/td>\n

\n

1.2<\/p>\n<\/td>\n

\n

TD<\/p>\n<\/td>\n

\n

2.4<\/p>\n<\/td>\n

\n

ND<\/p>\n<\/td>\n

\n

1<\/p>\n<\/td>\n<\/tr>\n

\n

YMR011W (HXT2)<\/em><\/p>\n<\/td>\n

\n

E<\/p>\n<\/td>\n

\n

21.1<\/p>\n<\/td>\n

\n

9.7<\/p>\n<\/td>\n

\n

SD<\/p>\n<\/td>\n

\n

15.3<\/p>\n<\/td>\n

\n

ND<\/p>\n<\/td>\n

\n

0<\/p>\n<\/td>\n<\/tr>\n

\n

YMR083W (ADH3)<\/em><\/p>\n<\/td>\n

\n

E<\/p>\n<\/td>\n

\n

2.2<\/p>\n<\/td>\n

\n

1.1<\/p>\n<\/td>\n

\n

SD<\/p>\n<\/td>\n

\n

0.9<\/p>\n<\/td>\n

\n

SD<\/p>\n<\/td>\n

\n

0<\/p>\n<\/td>\n<\/tr>\n

\n

YNL160W (YGP1)<\/em><\/p>\n<\/td>\n

\n

E<\/p>\n<\/td>\n

\n

2.7<\/p>\n<\/td>\n

\n

1.5<\/p>\n<\/td>\n

\n

WD<\/p>\n<\/td>\n

\n

1.1<\/p>\n<\/td>\n

\n

TD<\/p>\n<\/td>\n

\n

1<\/p>\n<\/td>\n<\/tr>\n

\n

YNL208W<\/p>\n<\/td>\n

\n

E<\/p>\n<\/td>\n

\n

3.1<\/p>\n<\/td>\n

\n

1.8<\/p>\n<\/td>\n

\n

WD<\/p>\n<\/td>\n

\n

2.7<\/p>\n<\/td>\n

\n

ND<\/p>\n<\/td>\n

\n

0<\/p>\n<\/td>\n<\/tr>\n

\n

YOR049C (RSB1)<\/em><\/p>\n<\/td>\n

\n

E<\/p>\n<\/td>\n

\n

3.3<\/p>\n<\/td>\n

\n

1.2<\/p>\n<\/td>\n

\n

TD<\/p>\n<\/td>\n

\n

2.5<\/p>\n<\/td>\n

\n

ND<\/p>\n<\/td>\n

\n

0<\/p>\n<\/td>\n<\/tr>\n

\n

YOR220W<\/p>\n<\/td>\n

\n

E<\/p>\n<\/td>\n

\n

4.5<\/p>\n<\/td>\n

\n

1.9<\/p>\n<\/td>\n

\n

SD<\/p>\n<\/td>\n

\n

3.0<\/p>\n<\/td>\n

\n

WD<\/p>\n<\/td>\n

\n

2<\/p>\n<\/td>\n<\/tr>\n

\n

YPL057C (SUR1)<\/em><\/p>\n<\/td>\n

\n

E<\/p>\n<\/td>\n

\n

3.2<\/p>\n<\/td>\n

\n

1.4<\/p>\n<\/td>\n

\n

SD<\/p>\n<\/td>\n

\n

1.9<\/p>\n<\/td>\n

\n

WD<\/p>\n<\/td>\n

\n

2<\/p>\n<\/td>\n<\/tr>\n

\n

YPL154C (PEP4)<\/em><\/p>\n<\/td>\n

\n

I<\/p>\n<\/td>\n

\n

3.9<\/p>\n<\/td>\n

\n

1.6<\/p>\n<\/td>\n

\n

SD<\/p>\n<\/td>\n

\n

2.2<\/p>\n<\/td>\n

\n

WD<\/p>\n<\/td>\n

\n

1<\/p>\n<\/td>\n<\/tr>\n

\n

 <\/p>\n<\/td>\n

\n

 <\/p>\n<\/td>\n

\n

 <\/p>\n<\/td>\n

\n

 <\/p>\n<\/td>\n

\n

 <\/p>\n<\/td>\n

\n

 <\/p>\n<\/td>\n

\n

 <\/p>\n<\/td>\n

\n

 <\/p>\n<\/td>\n<\/tr>\n

\n

 <\/p>\n<\/td>\n

\n

 <\/p>\n<\/td>\n

\n

 <\/p>\n<\/td>\n

\n

 <\/p>\n<\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n","protected":false},"excerpt":{"rendered":"

Table 4. Genes whose alkaline pH induction is reduced by calcineurin deficiency. Timing of the response is defined in the main text. Numbers indicate the induction level for each strain at the indicated timing(s). ND, not dependent, WD, weakly dependent, SD, strongly dependent, TD, totally dependent. See text for details.       ORF Timing […]<\/p>\n","protected":false},"author":20,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-207","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/webs.uab.cat\/gbml\/ca\/wp-json\/wp\/v2\/pages\/207","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/webs.uab.cat\/gbml\/ca\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/webs.uab.cat\/gbml\/ca\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/webs.uab.cat\/gbml\/ca\/wp-json\/wp\/v2\/users\/20"}],"replies":[{"embeddable":true,"href":"https:\/\/webs.uab.cat\/gbml\/ca\/wp-json\/wp\/v2\/comments?post=207"}],"version-history":[{"count":0,"href":"https:\/\/webs.uab.cat\/gbml\/ca\/wp-json\/wp\/v2\/pages\/207\/revisions"}],"wp:attachment":[{"href":"https:\/\/webs.uab.cat\/gbml\/ca\/wp-json\/wp\/v2\/media?parent=207"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}